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Posted: Aug 26, 2013

A skeleton for chromosomes

(Nanowerk News) Every single cell in the human body contains an entire copy of the genetic blueprint, the DNA. Its total length is about 3.5 meters and all of it has to fit into the cell’s nucleus, just one-hundredth of a millimeter in diameter. Blown up in proportion, this would equal the task of squeezing a 150km long string into a soccer ball. Just how the cell manages to wrap up its DNA so tightly is still poorly understood.
One way of compacting DNA is achieved by coiling it tightly around histone-proteins. This mechanism has been studied in detail and is the focus of an entire discipline, Epigenetics. However, simple organisms such as bacteria have to manage their DNA-packaging without histones, and even in human cells histones probably cannot do the job on their own.
A new role for an old molecule
A team of scientists at the Research Institute of Molecular Pathology (IMP) in Vienna can now present evidence for an additional mechanism involved in structuring DNA. Managing Director Jan-Michael Peters and his research group discovered that a protein-complex named cohesin has a stabilizing effect on DNA. In evolutionary terms, cohesin is very old and its structure has hardly changed over billions of years. It was present long before histones and might therefore provide an ancient mechanism in shaping DNA.
Cell biologists are already familiar with cohesin and its role in cell division. The protein-complex is essential for the correct distribution of chromosomes to daughter cells. It forms a molecular ring that keeps sister-chromatids together until the precise moment when segregation takes place. This function and the molecular structure of cohesin have been discovered by IMP-scientists in 1997.
Antonio Tedeschi, a postdoc in the group of Jan-Michael Peters, has now found evidence that cohesin supports the architecture of DNA in non-dividing (interphase) cells. He analyzed cells in which he had shut down the function of Wapl. This protein controls how tightly cohesin binds to DNA. Without Wapl, cohesin is ‘locked’ onto chromatin in an unusually stable state. As a consequence, cells are unable to express their genes correctly and cannot divide ("Wapl is an essential regulator of chromatin structure and chromosome segregation").
Artistic interpretation of fluorescent light micrographs of Wapl depleted nuclei which show cohesin vermicelli
Artistic interpretation of fluorescent light micrographs of Wapl depleted nuclei which show cohesin vermicelli. The nuclei have been pseudo-colored and scaled to different sizes.
Vermicelli keep DNA in shape
When he analyzed Wapl-depleted cells under the microscope, Tedeschi found elongated structures that he called “vermicelli” (Italian for small worms). Since one vermicello is present for each chromosome, he concluded that its function is to keep chromosomes in shape, rather like a skeleton.
“We think that the vermicelli are the ‘bones’ of interphase chromosomes”, says Jan-Michael Peters. “Just like our bodies depend on the bones for support, the cells depend very much on cohesin to retain their structure.”
The importance of the cohesin-system becomes obvious in cases where it is impaired. Several rare congenital diseases have been linked to mutations in the respective gene. The faulty structure of the cohesin molecule causes severe developmental retardation and is a serious medical condition. There are no causal therapies available at present.
Source: IMP - Forschungsinstitut für Molekulare Pathologie
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